HOCTAR- Host gene oppositely correlated targets Tool name | HOCTAR- Host gene oppositely correlated targets |
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URL | http://hoctar.tigem.it |
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Important features | Host gene oppositely correlated targets is used for prediction of microRNA targets and functional relationship between microRNAs and their target genes, based on a scoring system developed by comparison with transcriptomic data. |
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Citations | Gennarino VA, Sardiello M, Mutarelli M, Dharmalingam G, Maselli V, Lago G,
Banfi S. HOCTAR database: a unique resource for microRNA target prediction. Gene.
2011 Jul 1;480(1-2):51-8. Epub 2011 Mar 22. PubMed PMID: 21435384; PubMed Central
PMCID: PMC3113163.
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Year of publication | 2011 |
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Rank by usage frequency | 100 |
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Comments | |
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Function | FIND TARGET: database, SPECIES: human, http://hoctar.tigem.it, Host gene oppositely correlated targets is used for prediction of microRNA targets and functional relationship between microRNAs and their target genes- based on a scoring system developed by comparison with transcriptomic data. , Gennarino VA- Sardiello M- Mutarelli M- Dharmalingam G- Maselli V- Lago G-
Banfi S. HOCTAR database: a unique resource for microRNA target prediction. Gene.
2011 Jul 1;480(1-2):51-8. Epub 2011 Mar 22. PubMed PMID: 21435384; PubMed Central
PMCID: PMC3113163.
, 2011, 100, Online, I. SPECIES SUPPORTED INCLUDE: human II. QUERY OR INPUT DATA: 1. Select a microRNA from the given list. 2. Enter a target gene symbol (HUGO Gene Name-approved). III. OUTPUT DATA: details on predicted microRNA targets and (generated by softwares such as miRanda- TargetScan and PicTar) and microRNAs. Categorizes the output in terms of top 10%- 20%- 50%. |
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